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License of PhyloNet not in repository

Status: Open.

#15 In NakhlehLab/PhyloNet;

· alxndrdiaz opened on Feb 3, 2026

CalGTProb not finishing

Status: Open.

#14 In NakhlehLab/PhyloNet;

· thm52126 opened on Nov 17, 2025

Error: Unknown identifier

Status: Open.

#13 In NakhlehLab/PhyloNet;

· kfarleigh opened on Aug 8, 2025

MCMC_Seq can't generate proper phylogenetic network

Status: Open.

#12 In NakhlehLab/PhyloNet;

· Gipsy-The-Sheller opened on May 30, 2025

errorException in thread "main" java.lang.RuntimeException: Sequence data expected, but none found

Status: Open.

#11 In NakhlehLab/PhyloNet;

· liangssdd opened on Feb 22, 2024

error message "have nodes that don't have bootstrap value" in InferNetwork_MPL command

Status: Open.

#10 In NakhlehLab/PhyloNet;

· zilaijuand opened on Feb 3, 2024

[Feature request] Overiding nexus file argrument

Status: Open.

#9 In NakhlehLab/PhyloNet;

· Nobodyno-boop opened on Dec 14, 2022

Fix failing JUnit tests.

Status: Open.

#5 In NakhlehLab/PhyloNet;

· berkalpyakici opened on Jan 18, 2022

MCMC memory leak

Status: Open.

#2 In NakhlehLab/PhyloNet;

· caozhen-bupt opened on Oct 9, 2021

MCMC operator weights should be configurable at runtime

Status: Open.

#1 In NakhlehLab/PhyloNet;

· genomescale opened on Sep 3, 2021