error message "have nodes that don't have bootstrap value" in InferNetwork_MPL command

[zilaijuand]

Hi, When I used InferNetwork_MPL with parameter "-b 50", there will always be an error message like this:

Exception in thread "main" java.lang.IllegalArgumentException: Input gene tree (DGDT01:0.0438841888,((((HKXS01:0.0400290092,(JYNBE01:0.0514228357,(PJFCG:0.0211781265,QC_HK1605:0.0195880095):0.0166054409):0.0042552122):0.0034625673,((MJ01:0.0411839597,SB01:0.0376792158):0.0164906348,QC_HK2802:0.0329786098):0.0010553496):0.0053716731,MTDT01:0.053567102):0.0132096104,(QC_KBGCL06:0.0356823593,QC_KBGCL15:0.0482339303):0.0076013821):9.714759E-4,(QC_KBGCL07:0.0247602039,QC_XHSJT:0.0429463737):0.0214451491); have nodes that don't have bootstrap value

How can I produce a properly formatted tree file with bootstrap value?
Thanks.

[zilaijuand]

I checked the entered file and found that each tree has the bootstrap value.

[haoxianger]

I checked the entered file and found that each tree has the bootstrap value.

Hello! Have you solve this problem? Could you tell me how to solve it?

[KPapac]

I also got the same problem when running:
InferNetwork_ML (all) 4 -pl 15 -b 80 Phylonet_output;
Any ideas?

[KPapac]

Here is my nexus file, I am putting just the first tree of the many I have, but I get the same error:

#NEXUS

BEGIN TREES;

Tree window_10006 = (DSAL:0.163029,(DSUC:0.0795667,(DNEB:0.116548,(DINSKIM:0.0313653,(DTROCR115:0.0325275,(DWILAPA21:0.0180841,(DEQUCR145:0.0115307,(DPAUC1:0.00315538,(DPAUPRUNE:0.00764706):0.0100321)85:0.011386)100:0.0146793)100:0.00915604)97:0.00913311)89:0.0759299)100:0.0305288)95:0);
END;


BEGIN PHYLONET;

InferNetwork_ML (all) 4 -pl 15 -b 80 Phylonet_output;

END;