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juncBASE compatibility with BAMs files aligned to hg38 genome?

Status: Open.

#14 In anbrooks/juncBASE;

· santataRU opened on Jun 29, 2024

Trying to compare different alternative splicing tools and running into some errors with juncBASE

Status: Open.

#13 In anbrooks/juncBASE;

· asb3773 opened on Mar 7, 2021

Error when running build_DB_FromGTF.py

Status: Open.

#11 In anbrooks/juncBASE;

· sneha100895 opened on Jan 22, 2019

run_preProcess_by_chr_step1.py waitForChildren(children)

Status: Open.

#9 In anbrooks/juncBASE;

· allenmao777 opened on Jun 7, 2018

error about plotEntropyScores.py

Status: Open.

#8 In anbrooks/juncBASE;

· wiLLiaM0425000 opened on Dec 11, 2017

intron_exon_junction_counts.txt files empty

Status: Open.

#7 In anbrooks/juncBASE;

· mmilevskiy opened on Nov 9, 2017

AttributeError: 'NoneType' object has no attribute 'strip'

Status: Open.

#6 In anbrooks/juncBASE;

· Ambreen06 opened on Aug 25, 2017

pysqlite2.dbapi2.OperationalError: disk I/O error

Status: Open.

#5 In anbrooks/juncBASE;

· wxzheng001 opened on Jun 23, 2017

An error: ImportError: No module named rpy2.robjects

Status: Open.

#4 In anbrooks/juncBASE;

· maofengbiao opened on Apr 6, 2017

broad_helperFunctions.py not found

Status: Open.

#3 In anbrooks/juncBASE;

· mdozmorov opened on Nov 24, 2016

Problem Running preProcess_getASEventReadCounts_step3.py

Status: Open.

#2 In anbrooks/juncBASE;

· KASHISH72 opened on Jul 14, 2016