An error: ImportError: No module named rpy2.robjects #4
Description
/nfs/turbo/med-dou-lab/soft/anaconda2/lib/python2.7/site-packages/matplotlib/font_manager.py:273: UserWarning: Matplotlib is building the font cache using fc-list. This may take a moment.
warnings.warn('Matplotlib is building the font cache using fc-list. This may take a moment.')
/nfs/turbo/med-dou-lab/soft/anaconda2/lib/python2.7/site-packages/numpy/lib/function_base.py:586: VisibleDeprecationWarning: using a boolean instead of an integer will result in an error in the future
tmp_a = tmp_a[keep]
Not supporting deletions, yet e.g., 12M1D39M
Not supporting insertions, yet e.g., 35M1I14M
Traceback (most recent call last):
File "/nfs/turbo/med-dou-lab/soft/juncBASE/plotEntropyScores.py", line 400, in
if name == "main": main()
File "/nfs/turbo/med-dou-lab/soft/juncBASE/plotEntropyScores.py", line 151, in main
label="junction entropy")
File "/nfs/turbo/med-dou-lab/soft/anaconda2/lib/python2.7/site-packages/matplotlib/pyplot.py", line 2965, in hist
stacked=stacked, data=data, **kwargs)
File "/nfs/turbo/med-dou-lab/soft/anaconda2/lib/python2.7/site-packages/matplotlib/init.py", line 1819, in inner
return func(ax, *args, **kwargs)
File "/nfs/turbo/med-dou-lab/soft/anaconda2/lib/python2.7/site-packages/matplotlib/axes/_axes.py", line 5985, in hist
m, bins = np.histogram(x[i], bins, weights=w[i], **hist_kwargs)
File "/nfs/turbo/med-dou-lab/soft/anaconda2/lib/python2.7/site-packages/numpy/lib/function_base.py", line 589, in histogram
tmp_a_data = tmp_a.astype(float)
ValueError: could not convert string to float: K
/nfs/turbo/med-dou-lab/soft/anaconda2/lib/python2.7/site-packages/numpy/lib/function_base.py:586: VisibleDeprecationWarning: using a boolean instead of an integer will result in an error in the future
tmp_a = tmp_a[keep]
Not supporting deletions, yet e.g., 39M1D11M
Not supporting insertions, yet e.g., 27M1I4M
Traceback (most recent call last):
File "/nfs/turbo/med-dou-lab/soft/juncBASE/plotEntropyScores.py", line 400, in
if name == "main": main()
File "/nfs/turbo/med-dou-lab/soft/juncBASE/plotEntropyScores.py", line 151, in main
label="junction entropy")
File "/nfs/turbo/med-dou-lab/soft/anaconda2/lib/python2.7/site-packages/matplotlib/pyplot.py", line 2965, in hist
stacked=stacked, data=data, **kwargs)
File "/nfs/turbo/med-dou-lab/soft/anaconda2/lib/python2.7/site-packages/matplotlib/init.py", line 1819, in inner
return func(ax, *args, **kwargs)
File "/nfs/turbo/med-dou-lab/soft/anaconda2/lib/python2.7/site-packages/matplotlib/axes/_axes.py", line 5985, in hist
m, bins = np.histogram(x[i], bins, weights=w[i], **hist_kwargs)
File "/nfs/turbo/med-dou-lab/soft/anaconda2/lib/python2.7/site-packages/numpy/lib/function_base.py", line 589, in histogram
tmp_a_data = tmp_a.astype(float)
ValueError: could not convert string to float: K
/nfs/turbo/med-dou-lab/soft/anaconda2/lib/python2.7/site-packages/numpy/lib/function_base.py:586: VisibleDeprecationWarning: using a boolean instead of an integer will result in an error in the future
tmp_a = tmp_a[keep]
Not supporting deletions, yet e.g., 39M1D11M
Not supporting insertions, yet e.g., 27M1I4M