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Reduce/configure logging verbosity

enhancementNew feature or requestNew feature or request

Status: Open.

#105 In huishenlab/compartmap;

· jamespeapen opened on Jul 30, 2025

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v2

Standardize top level compartmap finding functions

Status: Open.

#87 In huishenlab/compartmap;

· jamespeapen opened on May 19, 2025

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v2

Set air as standard style

documentationDocumentationDocumentation

Status: Open.

#85 In huishenlab/compartmap;

· jamespeapen opened on May 13, 2025

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v2

A question about getABSignal() function with DNA methylation data

Status: Open.

#36 In huishenlab/compartmap;

· QianhuiWan opened on Dec 19, 2024

could this package be used to infer A/B from bulk ATAC-seq data?

Status: Open.

#29 In huishenlab/compartmap;

· Zeyu618 opened on Nov 18, 2024

Starting from a Seurat/Signac scATAC object?

Status: Open.

#28 In huishenlab/compartmap;

· BenayounLaboratory opened on Apr 12, 2024

estRMT probable issues

Status: Open.

#27 In huishenlab/compartmap;

· ouroukhai opened on Sep 6, 2023

MM285K array datasets?

Status: Open.

#24 In huishenlab/compartmap;

· jtxyz16 opened on Mar 6, 2022

Add back methylation array and WGMS data support

enhancementNew feature or requestNew feature or request

Status: Open.

#23 In huishenlab/compartmap;

· biobenkj opened on Nov 16, 2021

Add sparse matrix support for all functions

Status: Open.

Feature

#21 In huishenlab/compartmap;

· biobenkj opened on May 4, 2021

·  

v2

Generate figures and include script to re-run analyses in the paper

Status: Open.

#10 In huishenlab/compartmap;

· biobenkj opened on May 6, 2020

Finish building package down site for the documentation

documentationDocumentationDocumentation

Status: Open.

#8 In huishenlab/compartmap;

· biobenkj opened on May 6, 2020

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v2