Hi Johnson, I noticed that the assay = "bisulfite" argument of getABSignal() function doesn’t seem to be working. I wanted to ask if the getABSignal() function is compatible with WGBS data. The error message is listed below. Thank you so much for your help!
Calculating eigenvectors.
Error in match.arg(assay) : 'arg' should be one of “rna”, “atac”
Best regards,
Qianhui