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Pull requests: loculus-project/loculus

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Pull requests list

refactor(backend): move revocation versionComment from dedicated column to metadata backend related to the loculus backend component preview Triggers a deployment to argocd update_db_schema
#6198 opened Mar 26, 2026 by theosanderson-agent • Draft
3 of 7 tasks
feat(actions): NCBI taxonomy DB workflow notifies on success github_actions Pull requests that update GitHub Actions code
#6197 opened Mar 26, 2026 by maverbiest Loading…
2
feat(deposition): retry assembly creation failures due to FTP login e… deposition related to ENA/INSDC deposition
#6196 opened Mar 26, 2026 by anna-parker • Draft
3 tasks
chore(deps): bump requests from 2.32 to 2.33.0 in /preprocessing/dummy in the pip group across 1 directory dependencies Pull requests that update a dependency file python Pull requests that update python code
#6195 opened Mar 26, 2026 by dependabot bot Loading…
chore(deps): bump @astrojs/node from 9.5.2 to 10.0.3 in /website dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#6189 opened Mar 25, 2026 by dependabot bot Loading…
chore(deps-dev): bump the patch group in /website with 7 updates dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#6188 opened Mar 25, 2026 by dependabot bot Loading…
chore(deps-dev): bump the minor group in /website with 2 updates dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#6186 opened Mar 25, 2026 by dependabot bot Loading…
chore(deps): bump the minorandpatch group in /docs with 2 updates dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#6185 opened Mar 25, 2026 by dependabot bot Loading…
chore(deps): bump gradle/actions from 5 to 6 dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code
#6182 opened Mar 25, 2026 by dependabot bot Loading…
chore(deps): bump @astrojs/node from 9.5.2 to 10.0.0 in /website dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#6180 opened Mar 24, 2026 by dependabot bot Loading…
feat(prepro): add custom lineage functions preprocessing Issues related to the preprocessing component preview Triggers a deployment to argocd
#6174 opened Mar 20, 2026 by anna-parker Loading…
3 tasks
7
(feat): SeqSet details page graphs and layout updates preview Triggers a deployment to argocd seqset Related to seqsets website Tasks related to the web application
#6173 opened Mar 20, 2026 by tombch • Draft
3 tasks
2
feat(preprocessing): move maxSequencesPerEntry validation from backend to preprocessing backend related to the loculus backend component deployment Code changes targetting the deployment infrastructure preprocessing Issues related to the preprocessing component preview Triggers a deployment to argocd
#6166 opened Mar 19, 2026 by theosanderson-agent Loading…
3 of 5 tasks
9
chore(deps): bump the patch group across 1 directory with 7 updates dependencies Pull requests that update a dependency file java Pull requests that update Java code
#6163 opened Mar 19, 2026 by dependabot bot Loading…
Allow customization of data use terms agreement text deployment Code changes targetting the deployment infrastructure website Tasks related to the web application
#6149 opened Mar 17, 2026 by theosanderson • Draft
3 tasks done
1
feat(website): restore previous search button preview Triggers a deployment to argocd website Tasks related to the web application
#6147 opened Mar 16, 2026 by tombch • Draft
3 tasks
5
feat(website, config): add an option for search presets deployment Code changes targetting the deployment infrastructure website Tasks related to the web application
#6136 opened Mar 13, 2026 by anna-parker Loading…
3 tasks
1
5
feat(website, config): create a customDisplay for reference with variant information deployment Code changes targetting the deployment infrastructure preprocessing Issues related to the preprocessing component website Tasks related to the web application
#6133 opened Mar 13, 2026 by anna-parker Loading…
3 tasks done
20
testing deployment Code changes targetting the deployment infrastructure
#6130 opened Mar 12, 2026 by anna-parker • Draft
3 tasks
feat(prepro): refactor prepro to split up backend internal metadata from customizable metadata fields preprocessing Issues related to the preprocessing component
#6071 opened Mar 3, 2026 by anna-parker Loading…
2 of 3 tasks
10
theo-exp deployment Code changes targetting the deployment infrastructure
#6011 opened Feb 21, 2026 by theosanderson • Draft
feat(preprocessing): preserve attached files through nextclade pipeline deployment Code changes targetting the deployment infrastructure preprocessing Issues related to the preprocessing component
#6008 opened Feb 19, 2026 by theosanderson-agent Loading…
2 tasks
Custom lineage functions preprocessing Issues related to the preprocessing component website Tasks related to the web application
#6004 opened Feb 19, 2026 by anna-parker • Draft
3 tasks
1
2
feat(integration-tests): add tests for uncovered UI features e2e E2E test related tests Test related issues website Tasks related to the web application
#5995 opened Feb 17, 2026 by theosanderson-agent • Draft
3 of 4 tasks
8
demo: use cdk8s for deployment deployment Code changes targetting the deployment infrastructure
#5994 opened Feb 17, 2026 by theosanderson-agent • Draft
2
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