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set context variables for slurm training max cores mem #3076

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Merged
jlqfab merged 1 commit into from
Mar 20, 2026
Merged

set context variables for slurm training max cores mem #3076

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4 changes: 4 additions & 0 deletions files/galaxy/dynamic_job_rules/production/total_perspective_vortex/default_tool.yml.j2
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Expand Up @@ -34,6 +34,10 @@ tools:
pulsar_docker_volumes: "{{ pulsar_docker_volumes }}"
singularity_default_container_id: "{{ singularity_default_container_id }}"

# training destination overridable cores/mem values
slurm_training_max_cores: 2
slurm_training_max_mem: 7.6

scheduling:
reject:
- offline
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2 changes: 2 additions & 0 deletions files/galaxy/dynamic_job_rules/production/total_perspective_vortex/tools.yml
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Expand Up @@ -2256,6 +2256,8 @@ tools:
toolshed.g2.bx.psu.edu/repos/iuc/kallisto_quant/kallisto_quant/.*:
context:
max_concurrent_job_count_for_tool_user: 3
slurm_training_max_cores: 4
slurm_training_max_mem: 15.5
cores: 5
mem: 19.1
params:
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4 changes: 2 additions & 2 deletions files/galaxy/dynamic_job_rules/production/total_perspective_vortex/users.yml.j2
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Expand Up @@ -29,8 +29,8 @@ users:
)
training_job_matches_specs = slurm_preferred_for_training or helpers.tag_values_match(entity, include_tags, exclude_tags)
training_job_matches_specs
max_cores: 2
max_mem: max_cores * 3.8
max_cores: slurm_training_max_cores
max_mem: slurm_training_max_mem
context:
partition: training
scheduling:
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