Skip to content

set context variables for slurm training max cores mem#3076

Merged
jlqfab merged 1 commit intousegalaxy-au:masterfrom
cat-bro:set_context_variables_for_slurm_training_max_cores_mem
Mar 20, 2026
Merged

set context variables for slurm training max cores mem#3076
jlqfab merged 1 commit intousegalaxy-au:masterfrom
cat-bro:set_context_variables_for_slurm_training_max_cores_mem

Conversation

@cat-bro
Copy link
Copy Markdown
Collaborator

@cat-bro cat-bro commented Mar 19, 2026

Give default tool extra context variables

      slurm_training_max_cores: 2
      slurm_training_max_mem: 7.6

that can be overridden at entity level. The use case is kallisto_quant which is being used in an upcoming training. It’s not compatible with pulsar and needs more than 7.6GB RAM.

@cat-bro cat-bro requested a review from jlqfab March 20, 2026 01:06
@jlqfab jlqfab merged commit 074afb3 into usegalaxy-au:master Mar 20, 2026
1 check passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants