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Calculate PacBio filtered data percentage Fix linting from a comment #233: Issue comment #71 (comment) created by muffato
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Calculate PacBio filtered data percentage Fix linting from a comment #232: Issue comment #71 (comment) created by sainsachiko
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Calculate PacBio filtered data percentage Fix linting from a comment #231: Issue comment #71 (comment) created by muffato
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Calculate mapped vs unmapped read percentages Fix linting from a comment #230: Issue comment #119 (comment) created by muffato
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Merge pull request #199 from sanger-tol/code_cleanup sanger-tol LSF full size tests #68: Commit 7d28222 pushed by muffato
23s dev
dev
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nf-core linting comment nf-core linting comment #1679: completed by muffato
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nf-core linting comment nf-core linting comment #1678: in_progress by muffato
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nf-core linting comment nf-core linting comment #1677: requested by muffato
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Code cleanup Run nf-test #160: Pull request #199 opened by muffato
17m 13s code_cleanup
code_cleanup
17m 13s
Code cleanup nf-core linting #574: Pull request #199 opened by muffato
2m 16s code_cleanup
code_cleanup
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Should we use asm5 option for minimap2 Fix linting from a comment #229: Issue comment #168 (comment) created by muffato
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Update the PacBio read-filtering sub-workflow to run sanger-tol/hifi-trimmer Fix linting from a comment #228: Issue comment #151 (comment) created by muffato
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PB pre-alignment filtering Fix linting from a comment #227: Issue comment #124 (comment) created by muffato
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Replace blastn sub workflow Fix linting from a comment #226: Issue comment #114 (comment) created by muffato
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Hi-C pre-alignment QC Fix linting from a comment #225: Issue comment #122 (comment) created by muffato
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Illumina pre-alignment filtering Fix linting from a comment #224: Issue comment #125 (comment) created by muffato
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Use CRAM as the intermediate format, rather than BAM Fix linting from a comment #223: Issue comment #157 (comment) created by muffato
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Include samtools merge in the "sormadup" super-module Fix linting from a comment #222: Issue comment #156 (comment) created by muffato
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Merge pull request #196 from sanger-tol/samtools sanger-tol LSF full size tests #67: Commit 2bb47fb pushed by muffato
25s dev
dev
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Modules update Fix linting from a comment #221: Issue comment #196 (comment) created by muffato
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nf-core linting comment nf-core linting comment #1676: completed by muffato
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nf-core linting comment nf-core linting comment #1675: in_progress by muffato
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nf-core linting comment nf-core linting comment #1674: in_progress by muffato
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nf-core linting comment nf-core linting comment #1673: requested by muffato
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Modules update nf-core linting #573: Pull request #196 synchronize by muffato
2m 18s samtools
samtools
2m 18s