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Output file exists check

Status: Open.

#181 In s-andrews/FastQC;

· jannine-forst opened on Mar 13, 2026

./fastqc This is the source distribution of FastQC. You need to get the compiled version if you want to run the program

Status: Open.

#178 In s-andrews/FastQC;

· karthickbrlab opened on Mar 6, 2026

Sam file from stdin

Status: Open.

#177 In s-andrews/FastQC;

· Jelinek-J opened on Feb 3, 2026

AVITI sequencing: per-base sequence quality

Status: Open.

#172 In s-andrews/FastQC;

· vmkalbskopf opened on Dec 10, 2025

NormalDistribution: The Z-Score formula is actually the probability density function

Status: Open.

#166 In s-andrews/FastQC;

· PeterKneale opened on Oct 2, 2025

FastQC report duplication levels consultation

Status: Open.

#162 In s-andrews/FastQC;

· miryamcarrillo98 opened on Sep 2, 2025

Downsampling support

Status: Open.

#160 In s-andrews/FastQC;

· grendon opened on Aug 22, 2025

[Java Error]java.lang.InternalError

Status: Open.

#157 In s-andrews/FastQC;

· Ren-Meimei opened on Aug 14, 2025

Duplicate % is way higher than what fastqc estimates and what I manually calculate

Status: Open.

#153 In s-andrews/FastQC;

· sodiumnitrate opened on May 16, 2025

Supported platforms (ONT/PacBio)?

Status: Open.

#152 In s-andrews/FastQC;

· Rayna-Ma opened on May 13, 2025

java.io.EOFException(After bowtie2 excised rRNA, FastQC operation failed)

Status: Open.

#149 In s-andrews/FastQC;

· MR-D-CJ opened on Mar 12, 2025

Drastic duplication level mismatch for paired end reads, before & after deduplication

Status: Open.

#148 In s-andrews/FastQC;

· oskesr opened on Mar 12, 2025