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Add option to use MAFFT for alignment instead of HMMer

Status: Open.

#10 In pantherdb/TreeGrafter;

· dustine32 opened on May 26, 2023

URL for tgz specified in README no longer works

Status: Open.

#9 In pantherdb/TreeGrafter;

· cmungall opened on Oct 13, 2021

Ignore less reliable HMMer domain results (noted with '?') in reconstructing alignment

Status: Open.

#7 In pantherdb/TreeGrafter;

· dustine32 opened on Sep 17, 2020

hmmsearch - parsing

Status: Open.

#4 In pantherdb/TreeGrafter;

· rdfinn opened on Jan 5, 2018

Write tests for the existing code

Status: Open.

#3 In pantherdb/TreeGrafter;

· rdfinn opened on Jan 5, 2018

Deal with multi-significant matches

Status: Open.

#2 In pantherdb/TreeGrafter;

· rdfinn opened on Jan 5, 2018

Outstanding issues prior to release

Status: Open.

#1 In pantherdb/TreeGrafter;

· rdfinn opened on Jan 5, 2018