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Okinawa Institute of Science & Technology

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  1. Usiigaci Usiigaci Public

    Usiigaci: stain-free cell tracking in phase contrast microscopy enabled by supervised machine learning

    Jupyter Notebook 204 69

  2. LaTeX-templates LaTeX-templates Public

    Graduate School LaTeX templates for Lab rotation proposal + report, OIST beamer and Thesis + thesis proposal

    65 56

  3. optinist optinist Public

    calcium imaging pipeline tool

    TypeScript 48 15

  4. DenseObjectDetection DenseObjectDetection Public

    Detection of objects in an image using segmentation

    Python 36 14

  5. Physics-of-Behavior-Tutorials Physics-of-Behavior-Tutorials Public

    Jupyter Notebook 31 4

  6. DenseObjectAnnotation DenseObjectAnnotation Public

    Tool to annotate objects in images.

    JavaScript 20 8

Repositories

Showing 10 of 191 repositories
  • smartphone-robot-android Public

    Android development for smartphone-robot

    oist/smartphone-robot-android’s past year of commit activity
    Java 0 1 10 1 Updated Jan 26, 2026
  • BioinfoUgrp Public

    OIST Bioinfo user group

    oist/BioinfoUgrp’s past year of commit activity
    Shell 11 2 1 0 Updated Jan 26, 2026
  • neuro-workflow Public
    oist/neuro-workflow’s past year of commit activity
    Jupyter Notebook 0 MIT 0 1 0 Updated Jan 25, 2026
  • emevo Public

    Simluate Embodied Evolution of Agents

    oist/emevo’s past year of commit activity
    Jupyter Notebook 4 Apache-2.0 0 0 0 Updated Jan 25, 2026
  • sequence-space-dimension Public
    oist/sequence-space-dimension’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 23, 2026
  • smartphone-robot-cad Public

    All 3D CAD and PCB design files for smartphone-robot project.

    oist/smartphone-robot-cad’s past year of commit activity
    Python 0 Apache-2.0 1 0 0 Updated Jan 23, 2026
  • LuscombeU_BAR12_assembly Public
    oist/LuscombeU_BAR12_assembly’s past year of commit activity
    Shell 1 0 0 0 Updated Jan 14, 2026
  • BioinfoUgrp_UnixGoodies_Images Public

    Singularity images with cool Unix tools to be exported as modules in HPC clusters

    oist/BioinfoUgrp_UnixGoodies_Images’s past year of commit activity
    Dockerfile 3 0 1 0 Updated Jan 6, 2026
  • NEXTNetPy Public

    Python wrapper for the NEXTNet library for efficient simulation of epidemics on complex networks

    oist/NEXTNetPy’s past year of commit activity
    C++ 1 LGPL-3.0 0 0 0 Updated Dec 1, 2025
  • NEXTNet Public

    C++ implementation of the NEXT-Net algorithm for efficient simulation of epidemics on complex networks

    oist/NEXTNet’s past year of commit activity
    C++ 1 LGPL-3.0 0 0 0 Updated Dec 1, 2025
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