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Releases: huishenlab/tranquillyzer

v0.2.0

31 Dec 19:02
ec15959

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  • Tranquillyzer now offers split-bam subcommand. It can be used to split duplicate marked bam file, emitted by dedup subcommand, into individual bam files based on certain tags (CB by default).
  • Duplicate marked bam file now also includes base quality tags for cell barcodes and UMIs.
  • Tensorflow and tesnorflow-addons installation is now included within the environment.yml file. Users don't need to run separate commands to install the mentioned libraries.
  • Demultiplexed FASTA/FASTQ files are currently not compressed by Tranquillyzer. Users are advised to compressed these files manually, if required

v0.1.1

03 Dec 21:42
08193f5

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  • While undergoing multi-processing, rather than hanging-up in an endless wait, tranquillyzer now quits safely upon encountering certain GPU/tensorflow related errors.
  • Dockerfile now doesn't have commands to update certain libraries that were causing docker/singularity containers to produce different results while annotating reads using multi-GPU inference.

v0.1.0

22 Aug 16:44
d48f0d5

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Merge pull request #3 from AyushSemwal/main

Some minor CLI and README updates