Search results

Compress output FASTA/FASTQ

Status: Open.

#47 In huishenlab/tranquillyzer;

· jamorrison opened on Dec 18, 2025

Set up pre-commit

Status: Open.

#44 In huishenlab/tranquillyzer;

· jamorrison opened on Dec 15, 2025

Add segment base quals in fastq emission

Status: Open.

#41 In huishenlab/tranquillyzer;

· biobenkj opened on Dec 10, 2025

Add in model scoring metrics (e.g., F1, precision, recall, etc.) following training

enhancementNew feature or requestNew feature or request

Status: Open.

Feature

#37 In huishenlab/tranquillyzer;

· biobenkj opened on Dec 9, 2025

Add edit distances to label segments in both invalid and valid read parquet files

enhancementNew feature or requestNew feature or request

Status: Open.

Task

#36 In huishenlab/tranquillyzer;

· biobenkj opened on Dec 9, 2025

make concurrent barcode correction optional

Status: Open.

#33 In huishenlab/tranquillyzer;

· AyushSemwal opened on Dec 3, 2025

Option to specify preprocessed data directory

Status: Open.

#32 In huishenlab/tranquillyzer;

· AyushSemwal opened on Dec 2, 2025

Balancing error message display

Status: Open.

#31 In huishenlab/tranquillyzer;

· AyushSemwal opened on Nov 26, 2025

Resume from where the process broke/stopped

Status: Open.

#29 In huishenlab/tranquillyzer;

· AyushSemwal opened on Nov 25, 2025

Difference in Number of Reads

Status: Open.

#27 In huishenlab/tranquillyzer;

· jamorrison opened on Nov 25, 2025

Handling consecutive runs written to the same directory

Status: Open.

#25 In huishenlab/tranquillyzer;

· jamorrison opened on Nov 19, 2025

Parallelize across genomic windows instead of full chromosomes

Status: Open.

#14 In huishenlab/tranquillyzer;

· jamorrison opened on Nov 6, 2025