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Future feature - handle Nanopore modbam files with mC+hmC model

Status: Open.

#74 In huishenlab/biscuit;

· benbfly opened on Dec 25, 2025

Better error message when use_modbam is called on a BAM without modifications

Status: Open.

#73 In huishenlab/biscuit;

· benbfly opened on Nov 26, 2025

Unusual bias of SNP types?

Status: Open.

#71 In huishenlab/biscuit;

· wenzelm opened on Aug 13, 2025

[Issue] How to deal with TAPS data using biscuit?

Status: Open.

#62 In huishenlab/biscuit;

· YuanfengZhang opened on Mar 15, 2025

Methylation-aware structural variant calling

Status: Open.

#40 In huishenlab/biscuit;

· bounlu opened on Jul 17, 2023

[Issue] Remove requirement for snp .bed when running epiread

Status: Open.

#39 In huishenlab/biscuit;

· njspix opened on Jul 13, 2023

[Issue] Pileup errors

Status: Open.

#30 In huishenlab/biscuit;

· njspix opened on Sep 30, 2022

[Issue] Very high memory usage

Status: Open.

#4 In huishenlab/biscuit;

· njspix opened on Jun 26, 2020