Search results

[Q] Preprocessing pipeline from raw experimental data to the substitutions_raw_DMS files

Status: Open.

#104 In OATML-Markslab/ProteinGym;

· yutaka-fj opened on Apr 8, 2026

[New Model] StructureDCA

Status: Open.

#103 In OATML-Markslab/ProteinGym;

· MatsveiTsishyn opened on Mar 29, 2026

Incorrect sequence / structure for POLG_HCVJF in ProteinGym_AF2_structures.zip

Status: Open.

#101 In OATML-Markslab/ProteinGym;

· morgankohler opened on Mar 28, 2026

ESM-1b scoring strategy & v1.0→v1.1 score changes across all models

Status: Open.

#99 In OATML-Markslab/ProteinGym;

· ani11452 opened on Mar 7, 2026

Empty DMS_substitutions_Spearman_DMS_level.csv

Status: Open.

#97 In OATML-Markslab/ProteinGym;

· caioartus opened on Jan 30, 2026

Not sure how to call the pypi package

Status: Open.

#96 In OATML-Markslab/ProteinGym;

· lukaas33 opened on Jan 8, 2026

Handling proteins with few or no MSA hits in proteinnpt

Status: Open.

#94 In OATML-Markslab/ProteinGym;

· yuzimu1 opened on Dec 22, 2025

[New Model] PoET-2

Status: Open.

#93 In OATML-Markslab/ProteinGym;

· timt51 opened on Dec 17, 2025

Scripts for Clinical data benchmarks

Status: Open.

#87 In OATML-Markslab/ProteinGym;

· YinghuiChen-sky opened on Aug 21, 2025

Suggestion on Including More Combinatorially Complete Landscapes

Status: Open.

#85 In OATML-Markslab/ProteinGym;

· EvenStarArwen opened on Aug 11, 2025

Mapping protein IDs from NP to ENSP

Status: Open.

#72 In OATML-Markslab/ProteinGym;

· bschilder opened on Feb 25, 2025

Inconsistencies across raw sub vs. indel files

Status: Open.

#61 In OATML-Markslab/ProteinGym;

· bschilder opened on Jan 16, 2025