MedARC-AI · Nuna7 · Sep 5, 2025 · Sep 5, 2025 · Sep 5, 2025 · Sep 5, 2025
diff --git a/tools/bcss/download_bcss.sh b/tools/bcss/download_bcss.sh
@@ -0,0 +1,350 @@
+#!/usr/bin/env bash
+# Usage: ./download_bcss.sh /path/to/target_folder id_to_name.csv
+# Fully automatic BCSS dataset download using file IDs with original filenames
+
+set -e
+
+ROOT=${1:-"./data"}
+CSV_FILE=${2:-"id_to_name.csv"}
+DEST="$ROOT/bcss"
+
+echo "[INFO] Preparing BCSS dataset under $DEST"
+mkdir -p "$DEST/rgbs_colorNormalized"
+mkdir -p "$DEST/masks"
+
+# Ensure gdown is installed
+pip install --upgrade gdown
+
+RGBS_IDS=(
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+
+MASKS_IDS=(
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+    1yW1SeOY7_6k-6fxY8WI8ZrqRdez9q-oi
+    1XyDD7FDBor2faJoOdi6dTXK4qTbjd43W
+    12t9ioe-dlSbSMoiVYUf-imSyKrZl7N8o
+    1rpZ8LEH-ZRq6FuGWnazSjcUS6PHjY15b
+    1NE3ZTzInzDScTjOUNBlFPu64XNvNpEak
+    1-4jJx0ujJBlzc-IsDh-eVhQ_aQ_Bc8uh
+    151jntGXRr4FrgHvBUPutA6Roz32b889_
+    1AYkC23LLTHdVUigRIMPCBXC5U0xj-Muy
+    1hpTIyWP2QXzBGgdofns0ei8EiYzdMgNX
+    1ZdpDzLwEaz1BY2aNc15TawBnfMQx8eES
+    1n7b5BHb-nTHDCBVR5bLnJCBzcux06vWe
+    1qpbIEz66UOPqvTKX7jWl_lubQUpuGaXg
+    1uPgT314PU-4KP5hu9mLs0s0_g7xSA2Di
+    1KyW7b6eRV1GgmwUSknS3ZCq13r8W9NGC
+    1P8I2mo2spikkmgetNi8_A6Z4l7cTJgzD
+    1k7uwiXIfrGnnOc5HeRV8V9bCYb_mFCHx
+    1eGCZ7TLlqHZ0KMUL4uUn3rQtaM0fdyOY
+    1p2T0LdI07UY6KYJPiUwLRiR0iDw5YaoR
+    1AD6873yrMSR36YqgqRqbFYXC8SNGRc-F
+    1D5kNIo5NhuXJt-jfRu26_U2Mtgm7I8Ho
+    1qzS4ZwIhs2lB8ZDhePcf7G5ozpT8Q8qI
+    1A05L8rg2Nc6m5Y7tyyL6DmIQrrQKsKmk
+    1xl4XpmYTwOJXE-cplDrPsJT2dInS7i-Z
+    1rnH5NzRKqvFx2r3mn9BKAwEMJXAP_Qx3
+    1brzRBS6eG-KjLEFVZmrq9gQvUagQHvBy
+    1v5BxgZLq1uP9akQNGLblMcAPlbkj2gJ3
+    1AvzQt1iGugzx__wqIm5l1xRZh-hzTCUn
+    1Z8bpYbldTiOY_3nCFJs-lY5KBD7KisVA
+    1XKOuTTm7Jx77Htgza6iQjfnYVNlyqyDB
+)
+
+download_and_rename() {
+    FILE_ID=$1
+    FILENAME=$2
+    OUT_DIR=$3
+
+    echo "[INFO] Downloading FILE_ID: $FILE_ID -> $FILENAME ..."
+    gdown "https://drive.google.com/uc?id=$FILE_ID" -O "$OUT_DIR/$FILENAME.png" --continue
+    echo "[INFO] Saved to $OUT_DIR/$FILENAME"
+}
+
+# --- Read CSV and download each file to the correct folder ---
+tail -n +2 "$CSV_FILE" | while IFS=, read -r FILE_ID FILENAME; do
+    if [[ " ${RGBS_IDS[*]} " =~ " ${FILE_ID} " ]]; then
+        OUT_DIR="$DEST/rgbs_colorNormalized"
+    elif [[ " ${MASKS_IDS[*]} " =~ " ${FILE_ID} " ]]; then
+        OUT_DIR="$DEST/masks"
+    else
+        echo "[WARN] FILE_ID $FILE_ID not in RGB or MASK list, skipping."
+        continue
+    fi
+
+    download_and_rename "$FILE_ID" "$FILENAME" "$OUT_DIR"
+done
+
+echo "[INFO] All BCSS images downloaded successfully!"