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Need for an Updated and Tested Docker Image or Conda Environment setup.

Status: Open.

#54 In FreyrS/dMaSIF;

· Melikakmm opened on Nov 27, 2025

RuntimeError: operation does not have an identity.

Status: Open.

#52 In FreyrS/dMaSIF;

· sirenexcelsior opened on Mar 27, 2024

faces of the protein surface

Status: Open.

#51 In FreyrS/dMaSIF;

· lindafei01 opened on Mar 21, 2024

embedding example

Status: Open.

#50 In FreyrS/dMaSIF;

· johnnytam100 opened on Dec 10, 2023

Why "iface_preds " contain NAN when training dmasif_

Status: Open.

#48 In FreyrS/dMaSIF;

· BingzeWu opened on Oct 23, 2023

[Question] Are ligands or PTMs considered

Status: Open.

#46 In FreyrS/dMaSIF;

· georgkempf opened on Jun 9, 2023

Pre-trained model in Hugging face

Status: Open.

#44 In FreyrS/dMaSIF;

· sivakanishka91 opened on May 8, 2023

Problems regarding loss function and auroc

Status: Open.

#39 In FreyrS/dMaSIF;

· WHan-alter opened on Nov 27, 2022

Using main_training.py

Status: Open.

#38 In FreyrS/dMaSIF;

· OtaviaW opened on Oct 27, 2022

Running you example does not provide same ROC-AUC as claimed in the paper

Status: Open.

#37 In FreyrS/dMaSIF;

· wjs20 opened on Oct 19, 2022

No save model checkpoints for site prediction

Status: Open.

#35 In FreyrS/dMaSIF;

· wjs20 opened on Oct 15, 2022

dMaSIF for interaction prediction, how to find complementary regions?

Status: Open.

#34 In FreyrS/dMaSIF;

· DavidGraber opened on Sep 7, 2022