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a452a72
Draft siteSR download + ask_user port
mbrousil Feb 21, 2026
f559ebb
Quick dupe of sitesr to lakesr
mbrousil Feb 23, 2026
6cff2b3
which_sr
mbrousil Feb 23, 2026
92725d4
messaging updates
mbrousil Feb 23, 2026
e375df2
Draft lakesr poi download
mbrousil Feb 24, 2026
a1f8c1a
draft handoff downloads
mbrousil Feb 24, 2026
4f3f5e3
User can turn off file asks in lake/site downloads
mbrousil Feb 24, 2026
8bcbc07
*sr_download oopsies
mbrousil Feb 25, 2026
4f5cdd3
Fix title caps
mbrousil Feb 25, 2026
0e5086f
invisible NULLs and sketch match fun
mbrousil Feb 27, 2026
f24588f
Documentation
mbrousil Mar 3, 2026
4c62f59
Working on build_sr function. Mem lim probs
mbrousil Mar 9, 2026
3b83d33
build_sr using Arrow Tables
mbrousil Mar 12, 2026
bab310d
Working on siteSR matchups with arrow
mbrousil Mar 13, 2026
cf0b801
Some code improvement and package calls
mbrousil Mar 17, 2026
d15abd5
Spin off helpers, duckdb conversion
mbrousil Mar 18, 2026
475a3a0
Documentation update
mbrousil Mar 18, 2026
68f099c
Move ask_user()
mbrousil Mar 18, 2026
055f053
save_location in match_siteSR_to_WQP
mbrousil Mar 24, 2026
45a47a2
cli_alert_success & documentation
mbrousil Mar 24, 2026
079d8ad
siteSR time handling from Gemini
mbrousil Mar 25, 2026
bf564d3
Mostly documentation
mbrousil Mar 25, 2026
ff31948
Vignette update + switch to {cli}
mbrousil Mar 26, 2026
3077d7d
Documentation
mbrousil Mar 26, 2026
128455f
Draft matchup vignette, no handoffs
mbrousil Mar 26, 2026
0bb2d43
Draft apply_handoffs
mbrousil Mar 26, 2026
2ad04e6
Documentation updates
mbrousil Mar 27, 2026
97d39d2
Alert on handoffs. Finish matchups vignette draft
mbrousil Mar 27, 2026
f503bd2
handoff download bug, example workflow vignette
mbrousil Mar 27, 2026
71a9714
Example updates
mbrousil Mar 27, 2026
6b7416d
document
mbrousil Mar 27, 2026
b80b0c3
build_sr file check bug
mbrousil Apr 2, 2026
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2 changes: 2 additions & 0 deletions .Rbuildignore
Original file line number Diff line number Diff line change
@@ -1,3 +1,5 @@
^AquaMatchr\.Rproj$
^\.Rproj\.user$
^LICENSE\.md$
^doc$
^Meta$
2 changes: 2 additions & 0 deletions .gitignore
Original file line number Diff line number Diff line change
Expand Up @@ -50,3 +50,5 @@ rsconnect/
.Rproj.user
inst/doc
.DS_Store
/doc/
/Meta/
25 changes: 17 additions & 8 deletions DESCRIPTION
Original file line number Diff line number Diff line change
Expand Up @@ -2,10 +2,11 @@ Package: AquaMatchr
Title: Download, Join, and Analyze AquaMatch Data Products
Version: 0.0.0.9000
Authors@R: c(
person("Matthew", "Brousil", "matthew.brousil@colostate.edu", role = c("aut", "cre"), comment = c(ORCID = "0000-0001-8229-9445")),
person("Matthew", "Ross", "Matt.Ross@colostate.edu", role = "aut"),
person("Radical Open Science Syndicate", role = "cph")
)
person("Matthew", "Brousil", email = "matthew.brousil@colostate.edu",
role = c("aut", "cre"), comment = c(ORCID = "0000-0001-8229-9445")),
person("Matthew", "Ross", email = "Matt.Ross@colostate.edu",
role = "aut"),
person("Radical Open Science Syndicate", role = "cph"))
Description: Simplifies the downloading, joining, and analysis of AquaMatch
data products. Download in-situ and surface reflectance ('SR') data from the
Environmental Data Initiative ('EDI'), create matchups between in-situ and
Expand All @@ -15,14 +16,22 @@ Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
Imports:
arrow,
cli,
DBI,
dbplyr,
dplyr,
tidyr
Suggests:
duckdb,
EDIutils,
knitr,
magrittr,
purrr,
readr,
rlang,
tidyr
Suggests:
knitr,
rmarkdown,
testthat (>= 3.0.0)
testthat (>= 3.0.0),
zen4R
VignetteBuilder: knitr
Config/testthat/edition: 3
2 changes: 2 additions & 0 deletions LICENSE
Original file line number Diff line number Diff line change
@@ -0,0 +1,2 @@
YEAR: 2026
COPYRIGHT HOLDER: Radical Open Science Syndicate and all contributors
2 changes: 1 addition & 1 deletion LICENSE.md
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
# MIT License

Copyright (c) 2025 Radical Open Science Syndicate and all contributors
Copyright (c) 2026 Radical Open Science Syndicate and all contributors

Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal
Expand Down
46 changes: 45 additions & 1 deletion NAMESPACE
Original file line number Diff line number Diff line change
@@ -1,4 +1,48 @@
# Generated by roxygen2: do not edit by hand

export(download_RiverSR)
export("%>%")
export(apply_handoffs)
export(build_sr)
export(download_lakeSR)
export(download_parameters)
export(download_riverSR)
export(download_siteSR)
export(match_siteSR_to_WQP)
importFrom(DBI,dbConnect)
importFrom(DBI,dbDisconnect)
importFrom(DBI,dbExecute)
importFrom(EDIutils,list_data_package_revisions)
importFrom(EDIutils,read_data_entity)
importFrom(EDIutils,read_data_entity_names)
importFrom(EDIutils,read_data_package_citation)
importFrom(arrow,open_dataset)
importFrom(arrow,to_duckdb)
importFrom(arrow,write_parquet)
importFrom(cli,cli_abort)
importFrom(cli,cli_alert_info)
importFrom(cli,cli_alert_success)
importFrom(cli,cli_alert_warning)
importFrom(dbplyr,sql_render)
importFrom(dplyr,across)
importFrom(dplyr,any_of)
importFrom(dplyr,case_when)
importFrom(dplyr,filter)
importFrom(dplyr,if_else)
importFrom(dplyr,inner_join)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,select)
importFrom(dplyr,sql)
importFrom(dplyr,where)
importFrom(duckdb,duckdb)
importFrom(magrittr,"%>%")
importFrom(purrr,map)
importFrom(purrr,walk)
importFrom(readr,read_csv)
importFrom(readr,write_csv)
importFrom(rlang,"!!")
importFrom(rlang,":=")
importFrom(rlang,sym)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,pivot_wider)
importFrom(utils,globalVariables)
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