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yuummmer/README.md

Build FAIR R Python

Open to bioinformatics-oriented PM roles, data stewardship, or short consulting on data quality & FAIR workflows.

Hi, I'm Jenny!

10 yrs Product Management (enterprise SaaS, integrations) → now shipping open-source tools for data quality, FAIR workflows, and reproducible science.

  • 🔬 Now: Building FAIRy — a local-first validator/packager for research datasets (Python/R).
  • 📊 Also: Weekly TidyTuesday explorations + small R/Python tools.
  • 🌱 Learning in public: notes & experiments in my digital garden.
  • 🎨 Fun fact: I’m a glass artist — see Mahaila Glass.

Selected work

  • 🧰 FAIRy (core & skeleton): local-first dataset validation, rulepacks, pass/warn/fail reports.
  • 📈 Annual Report Analyzer: text mining + LLM summaries on public filings.
  • 🧪 FDA cosmetics RAG bot: guideline Q&A with document grounding.

Tech

Python · Pandas · JSON Schema · YAML · R · tidyverse · Streamlit · LangChain/Ollama · GitHub Actions

Connect

If you’re into FAIR data, open science tooling, or bioinformatics PM roles—let’s chat.

Jenny's GitHub stats

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  1. cosmetic-advisor-chatbot cosmetic-advisor-chatbot Public

    LLM-based RAG chatbot for FDA cosmetic regulatory guidance

    Python

  2. pyladies-crane-demo pyladies-crane-demo Public

    Lightning talk demo for PyLadies exploring crane observations with TidyTuesday data using Python

    Jupyter Notebook 1

  3. fairy-site fairy-site Public

    Marketing & docs site for FAIRy — a local tool to fix, pre-check, and export research datasets.

    TypeScript

  4. fairy-core fairy-core Public

    Local-first dataset preflight: rules-based validation, fix guidance, and shareable reports — zero cloud by default.

    Python 3

  5. fairy-rulepack-registry fairy-rulepack-registry Public

    Machine-readable registry of FAIRy rulepacks (IDs, repos, versions, metadata) to support discovery and future CLI install/fetch.

    Python

  6. fairy-rulepacks-geo fairy-rulepacks-geo Public

    Public CC0 rulepacks for FAIRy’s GEO workflows: validate sample/file manifests and generate preflight reports.