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STEPS FOR RUNNING MIRAI ON A REMOTE HPC WITHIN A SINGULARITY CONTAINER

Transfer .tar file to remote HPC directory
$ rsync -avPz oncoserve_mirai_0.3.1.tar foo@host: PATH_T0_DIR

Activate Singularity module on HPC:
$ module load gcc/8.3.0
$ module load singularity/3.6.4

Covert .tar file to singularity image (writeable sandbox format used here)
Within the oncoserve_mirai_0.3.1.tar file directory:
$ singularity build --disable-cache --sandbox oncoserve_mirai_0.3.1.simg docker-archive://oncoserve_mirai_0.3.1.tar
"--disable-cache" option only necessary if encountering disk space limitation for cache or unable to change cache directory:

RUNNING SINGULARITY SHELL WITH SANDBOX IMAGE IN PLACE:

$ singularity shell --bind PATH_TO_DATA_DIR:/data oncoserve_mirai_0.3.1.simg /bin/zsh
this takes you into the singularity shell

:
Singularity> cd /root/OncoNet/
Singularity> pip install -r requirements.txt