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Lesion foundation model (LFM) with self-supervised learning on lesion-centered CT patches

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Name		Name	Last commit message	Last commit date
Latest commit History 17 Commits
LFM_pretraining		LFM_pretraining
PCA		PCA
CT_FM_environment.yml		CT_FM_environment.yml
FusionPhase_FM_ABMIL.py		FusionPhase_FM_ABMIL.py
README.md		README.md
workflow.jpg		workflow.jpg

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Lesion foundation model (LFM)

Source codes:

a. Self-supervised pre-training of LFM

b. Downstream adaptation with attention-based multiple instance learning

c. Biomarker discovery via principal component analysis

Source data:

Lesion patches from DeepLesion dataset used for LFM pretraining and Model weights of LFM

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Lesion foundation model (LFM) with self-supervised learning on lesion-centered CT patches

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Python 100.0%