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Introduction

esATAC is a highly integrated easy-to-use R package published in Bioconductor. It covers essential steps for ATAC-seq data analysis, including raw data processing, quality control and downstream statistical analysis such as peak calling, enrichment analysis and transcription factor footprinting.. what's more, esATAC supports one command line execution for preset pipelines, and provides flexible interfac-es for building customized pipelines.
esATAC can be installed easily under appropriate R environment. Here, we present the installation tutorial for esATAC and its dependence under Linux, Windows and MAC OS.