Describe the bug
The original.log is without rescoring, but it displays the percolator features when mokapot is chosen.
To Reproduce
Steps to reproduce the behavior:
Run rescoring with the following mokapot:
"fdr_estimation_method": "mokapot"
Expected behavior
original.log should only contain features from the sequence search, not the ones we generate with the model.
Describe the bug
The original.log is without rescoring, but it displays the percolator features when mokapot is chosen.
To Reproduce
Steps to reproduce the behavior:
Run rescoring with the following mokapot:
"fdr_estimation_method": "mokapot"
Expected behavior
original.log should only contain features from the sequence search, not the ones we generate with the model.