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Releases: vuqv/Entanglement_database

v1.0

22 Jul 23:48

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v1.0 Pre-release
Pre-release

For this release (V1.0), we provide entanglement information exclusively for high-quality AlphaFold structures. A high-quality structure is defined as having an overall average pLDDT score of 70 or higher. We focus specifically on entanglements within these structures.

Entanglements are considered valid if the contact near the loop has pLDDT scores greater than 70 for both residues. Additionally, crossing residues are systematically checked (more explanation can be found in Release_notes file)

For more details, please refer to the release notes file.

v0.1

02 Jul 00:27

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This release contains whGLN information, linking numbers between the loop and whole tails.

Data in this release also has all structures but with the average pLDDT information, we can easily select the quality cutoff to use, i.e pLDDT >=70 for high-quality structure (Note that pLDDT was designed for per-residue prediction but reasonable to select structures based on average pLDDT).

Full Changelog: v0...v0.1

pre-release v0

30 Jun 19:38

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pre-release v0 Pre-release
Pre-release

This is name prelocation for the first release of data.
This database will use the fixed release model. Each release will have list of updated information in the dabase

Full Changelog: https://github.com/vuqv/Entanglement_database/commits/v0