Releases: vuqv/Entanglement_database
v1.0
For this release (V1.0), we provide entanglement information exclusively for high-quality AlphaFold structures. A high-quality structure is defined as having an overall average pLDDT score of 70 or higher. We focus specifically on entanglements within these structures.
Entanglements are considered valid if the contact near the loop has pLDDT scores greater than 70 for both residues. Additionally, crossing residues are systematically checked (more explanation can be found in Release_notes file)
For more details, please refer to the release notes file.
v0.1
This release contains whGLN information, linking numbers between the loop and whole tails.
Data in this release also has all structures but with the average pLDDT information, we can easily select the quality cutoff to use, i.e pLDDT >=70 for high-quality structure (Note that pLDDT was designed for per-residue prediction but reasonable to select structures based on average pLDDT).
Full Changelog: v0...v0.1
pre-release v0
This is name prelocation for the first release of data.
This database will use the fixed release model. Each release will have list of updated information in the dabase
Full Changelog: https://github.com/vuqv/Entanglement_database/commits/v0