🚀 Bioinformatics Analyst @ Leidos Biomedical Research | NIH/NCI
🔬 I build scalable Nextflow/Snakemake workflows for Exome & RNA-seq data
☁️ AWS HealthOmics | HPC (Biowulf)
Current Focus:
- Migrating Oncogenomics pipelines to AWS HealthOmics
- Pediatric cancer genomics (CCDI, MCI, TARGET, Kids First datasets)
- Antigen presentation pathways
💻 Most of my commits and active development work are in the CCRGeneticsBranch organization repositories.
📌 Highlighted Workflows:
- Oncogenomics_NF_WF – Exome + RNA-seq pipeline
- Meltzerlab workflow - Nextflow pipeline for human, dog and mouse genomes
- MVP_Snakemake – Snakemake pipeline prototype
- ngs_pipeline_khanlab - Snakemake pipeline Exome, RNAseq, WGS
- HowTos Documentation – Guides, tutorials, and best practices for custom scripts.
