Search results

CellSAM Boundaries are Much Bigger than the Cells

Status: Open.

#104 In vanvalenlab/cellSAM;

· DarioS opened on Nov 13, 2025

2D labels contain nested instances (cell fully inside another)

Status: Open.

#103 In vanvalenlab/cellSAM;

· YueXia-natsu opened on Oct 16, 2025

Multi GPU support

Status: Open.

#102 In vanvalenlab/cellSAM;

· dsatyam09 opened on Oct 15, 2025

Pre-trained model weights - official release, version 1.2

Models and DatasetsRelated to pre-trained model weights and/or published datasetsRelated to pre-trained model weights and/or published datasets

Status: Open.

#90 In vanvalenlab/cellSAM;

· rossbar opened on Sep 12, 2025

Deployment at cellsam.deepcell.org transition to new infrastructure

Status: Open.

#75 In vanvalenlab/cellSAM;

· DarioS opened on Jul 29, 2025

Is This Preprocessing Pipeline Suitable for H&E-Stained RGB Input?

bugSomething isn't workingSomething isn't working

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#74 In vanvalenlab/cellSAM;

· vadori opened on Jul 21, 2025

Apply segmentation to H&E images

Status: Open.

#63 In vanvalenlab/cellSAM;

· maiskovich opened on Apr 10, 2025

Exporting to ONNX possible?

Status: Open.

#62 In vanvalenlab/cellSAM;

· ajinkya-kulkarni opened on Apr 2, 2025

Wholeslide segmentation performance issues

bugSomething isn't workingSomething isn't working

Status: Open.

#52 In vanvalenlab/cellSAM;

· rossbar opened on Mar 17, 2025

Ensure output labels are sequential

Status: Open.

Bug

#42 In vanvalenlab/cellSAM;

· rossbar opened on Feb 21, 2025

Single channel uint8 input fails with <code>low_contrast_enhancement=True</code>

bugSomething isn't workingSomething isn't working

Status: Open.

#33 In vanvalenlab/cellSAM;

· rossbar opened on Feb 13, 2025

<code>cellsam_pipeline</code> interface

Status: Open.

#31 In vanvalenlab/cellSAM;

· rossbar opened on Feb 13, 2025