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Af2 reuse msas#164

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neoformit wants to merge 24 commits intomasterfrom
af2-reuse-msas
Open

Af2 reuse msas#164
neoformit wants to merge 24 commits intomasterfrom
af2-reuse-msas

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@neoformit
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This creates a new feature in the AF2 tool, that enables users to:

  • Collect the MSAs (multiple sequence alignments) from their AF job as a collection of ZIP archives
  • Select those MSA archives in subsequent jobs to re-use them to improve efficiency and reduce job times
  • Run AF2 in an MSA-only mode which will do nothing but compute MSAs

@neoformit neoformit requested a review from mthang April 16, 2025 05:52
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I fixed what I could from the tests, but I can't help that planemo can't run the AF tests. And no idea what the other failure is, there's no error message.

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