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@umich-biostatistics

Department of Biostatistics at the University of Michigan

README.md

U-M Biostatistics GitHub

Welcome! 👋

This Repository is run by the School of Public Health Department of Biostatistics Research Computing staff.

Here you will find:

  • R Packages produced by the department
  • Example workflows and templates for
    • Reproducible research
    • SLURM batch scripts
    • Tools like SnakeMake

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  1. HPC-R-Examples HPC-R-Examples Public

    Example R jobs and scripts for HPC use.

    R 2

  2. reproducible-research-example reproducible-research-example Public

    Example from the computing workshop "Reproducible Research: Best Practices for R and HPC Clusters"

    R 1 1

  3. snakemake-example snakemake-example Public

    Example snakemake workflow, including slurm executor for cluster use.

    Python

  4. intro-to-git intro-to-git Public

    slides for intro to git/github

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