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Revive merge-ts hdf5 merging #86

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Merged
lispandfound merged 18 commits into from
Jan 20, 2026
Merged

Revive merge-ts hdf5 merging #86

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fe0d0a3
fix(merge_ts): revive hdf5 version of merge-ts
lispandfound Jan 8, 2026
f7ecbf7
refactor(merge_ts): extract out logic into smaller functions
lispandfound Jan 8, 2026
d4a8da4
fix: correct numpy types for arrays
lispandfound Jan 8, 2026
09d4ae4
fix: correct lat lon array logic
lispandfound Jan 8, 2026
cc493a1
fix: Metadata -> metadata
lispandfound Jan 8, 2026
662a6a1
refactor(merge-ts): extract module-level constant
lispandfound Jan 8, 2026
f3c6b2e
docs(merge-ts): remove outdated npt.ndarray accessors
lispandfound Jan 8, 2026
9635a2e
feat(merge-ts): validate metadata and array shapes before dataset cre…
lispandfound Jan 8, 2026
abd9e0e
feat(merge-ts): raise FileNotFoundError when glob pattern does not ma…
lispandfound Jan 8, 2026
a46183e
docs(merge-ts): merge_ts -> merge-ts
lispandfound Jan 8, 2026
7b8a6bc
fix(merge-ts): correctly label dtype as uint16
lispandfound Jan 8, 2026
306ef26
fix(merge-ts): use valid fill value
lispandfound Jan 8, 2026
e5eae37
refactor(merge-ts): extract more robust quantisation logic
lispandfound Jan 8, 2026
0365d32
docs(merge-ts): apply PR suggestions
lispandfound Jan 8, 2026
f0c7538
docs(merge-ts): improve quantisation docstring and reverse max_bound …
lispandfound Jan 8, 2026
06f5205
fix(merge-ts): add CLI validation for options
lispandfound Jan 8, 2026
7123293
Merge branch 'revive_hdf5_merge_ts' of github.com:ucgmsim/workflow in…
lispandfound Jan 8, 2026
7db7ba3
fix(merge-ts): use fill-value as initialisation
lispandfound Jan 8, 2026
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1 change: 1 addition & 0 deletions pyproject.toml
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Original file line number Diff line number Diff line change
Expand Up @@ -61,6 +61,7 @@ generate-rupture-propagation = "workflow.scripts.generate_rupture_propagation:ap
copy-domain-parameters = "workflow.scripts.copy_velocity_model_parameters:app"
create-e3d-par = "workflow.scripts.create_e3d_par:app"
generate-stoch = "workflow.scripts.generate_stoch:app"
merge-ts = "workflow.scripts.merge_ts:app"
hf-sim = "workflow.scripts.hf_sim:app"
bb-sim = "workflow.scripts.bb_sim:app"
im-calc = "workflow.scripts.im_calc:app"
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