Single-Cell Atlas Builder is a modular platform for processing, integrating, and visualizing single-cell RNA-seq datasets. It combines FastAPI, Scanpy, and CellTypist for efficient analysis, with optional LLM-powered summaries for cluster and pathway interpretation.
A repository of pipelines for single-cell data in Nextflow DSL2. Here updated to make SCENIC single- and multi-run functional with modern v2 feather files
Modular single-cell transcriptomics pipelines for Alzheimer’s disease, integrating R and Python workflows.
Add a description, image, and links to the pyscenic topic page so that developers can more easily learn about it.
To associate your repository with the pyscenic topic, visit your repo's landing page and select "manage topics."