A tool for representing genomic potential and transcriptomic expression into KEGG pathways

A collection of tools to download and process KEGG database

🤝 Tool for mining KEGG pathways completeness data from eggNOG-mapper annotations

This module extends the Tripal Analysis Module and provides a method for loading of KEGG ortholog assignments derived from the KEGG Automated Annotation Server (KAAS). The module reads the compressed .heir file or alternatively an expanded heir directory. KEGG assignments appear on each feature page, and a full KEGG report is available for brows…

Create HMMs from KEGG orthologs

Repository for the presentation of work developed by the student Duarte Velho for the UC Project, of the Master in Bioinformatics of the University of Minho, academic year 23-24.

KEGG-Chem is a Python program designed to retrieve KEGG compounds and associated data using an input of KEGG orthologues or modules, and can also retrieve SMILES, SDF files, and more from PubChem.

Command line tool to examine KEGG PATHWAY

A .NET wrapper for the Kyoto Encyclopedia of Genes and Genomes (KEGG) API.

Check the neighbouring genes in KEGG genomes for KEGG Orthology (KO), domains and keywords

Orthologs Databases — Archive of bioinformatics databases and PHP processing pipelines for cross-species ortholog analysis across 7 model organisms (2012-2016). Integrates data from 21 sources including HomoloGene, InParanoid, OrthoMCL, eggNOG, BioGRID, STRING, Gene Ontology, KEGG, and Reactome.