Liuy12 / SCdeconR Star 7 Code Issues Pull requests Deconvolution of bulk RNA-seq data using single-cell RNA-seq data as reference r single-cell differential-expression deconvolution geneset-enrichment-analysis ffpe bulk-rna-seq-deconvolution scdeconr Updated Jul 14, 2025 HTML
rabiafidan / pure-faf Star 0 Code Issues Pull requests Formalin artefact filtering of tumour sample VCF files cancer-genomics variant-filtration ffpe Updated Dec 10, 2025 HTML
bellabluebird / wgs_covaris_ffpe Star 0 Code Issues Pull requests Pipeline designed to evalute FFPE processing kits through qc, variant calling, and truth set comparison analysis. Configured for AWS Batch deployment. wgs nextflow-pipeline ffpe covaris kit-comparison Updated Oct 3, 2025 Nextflow