massdataset is part of the tidymass ecosystem.
massdataset provides the mass_dataset class for organizing rectangular small-molecule profiling datasets in a consistent structure. It also provides core utilities for creating, accessing, combining, summarizing, and converting mass_dataset objects across the broader tidymass ecosystem.
massdataset is designed as an infrastructure package. It helps you keep imported datasets in a unified format before downstream analysis and makes it easier to move between different tidymass tools without rewriting data containers.
You can install the development version of massdataset from GitHub.
if(!require(remotes)){
install.packages("remotes")
}
remotes::install_github("tidymass/massdataset")Additional installation details are available here.
Start with the online documentation:
If you have questions about massdataset, contact me by email or through the channels below.
WeChat: shenxt1990
If you use massdataset in your publications, please cite this paper:
Shen, X., Yan, H., Wang, C. et al. TidyMass an object-oriented reproducible analysis framework for LC–MS data. Nat Commun 13, 4365 (2022).
Thank you for using massdataset.