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@thepanlab

the PAN lab

The Parallel computing, Artificial intelligence, and Network science (PAN) Lab in the School of Computer Science and the Dept. of Microbiology and Plant Biology

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  1. Seq2MAG Seq2MAG Public

    Metagenomics workflow from sequencing data to Metagenome-Assembled Genomes (MAGs)

    Python 9 3

  2. Sipros4 Sipros4 Public

    Sipros 4 for stable isotopic mass spectrum metaproteomics proteomics

    C 8 1

  3. Supercomputing_Instructions Supercomputing_Instructions Public

    Useful information to use the supercomputers

    Shell 4 3

  4. LINA LINA Public

    Jupyter Notebook 3

  5. NACHOS NACHOS Public

    Pipeline to process images with CNN: NACHOS and DACHOS. From the paper under writing "Integration of nested cross-validation, automated hyperparameter optimization, high-performance computing to re…

    Jupyter Notebook 2

  6. sipros5 sipros5 Public

    Forked from xyz1396/sipros5

    Sipros5, a proteomics tool designed for identifying and quantifying isotopically labeled proteins—especially 13C-15N-18O-2H-labeled—in complex microbial communities using scalable and modular high-…

    C 2

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