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Converts gene-set feature lists to biological pathway embeddings with enrichment analysis attributes.

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gpath2vec

A Python package for converting gene-sets to biological pathways embeddings with enrichment analysis attributes.

Features:

  1. Perform pathway enrichment analysis
  2. Create pathway networks
  3. Generate pathway embeddings

gpath2vec.png

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Converts gene-set feature lists to biological pathway embeddings with enrichment analysis attributes.

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