Computational biologist/bioinformatician focusing on oncology genomics (WGS/WES, single-cell, RNA-seq, epigenetics) and production pipelines (Snakemake, GATK, Slurm). I love turning messy sequencing data into reliable, reproducible insights.
Highlights
- 🔧 Reproducible NGS pipelines (Snakemake + conda/containers)
- 🧬 Tumor evolution & mutational signatures
- 🗄️ Data plumbing with PostgreSQL; scalable HPC workflows
- 📈 Clean, decision-ready analyses (R/Python)
Code Snippets
Tech: Python, R, Snakemake, GATK, PostgreSQL, Slurm, GitHub Actions
Contact: tamrin.chowdhury@gmail.com · LinkedIn
Publication list: Google Scholar