LibStatGen.1.0.15 Release Notes - Released 02/12/2021
- Fixes various build errors
- CigarHelper - update clip from end to return an error if the clip position is past the end of the read
- Removed redundant pos member of vcf record.
- Adds VcfRecordInfo::getInfoPair().
- FASTQ - update so it isn't an error if there is a single blank line at the end of the file (multiple blank lines will still result in an error being reported)
- Modified warnings() to print out to stderr rather than stdout
- VcfFile - add getFileName method
- Update bam/test for testing single record file's IsEOF
- SamFile::IsEOF - update for SamFiles to check SamInterface to see if the first Record has been read, but not processed - to avoid returning EOF for file with a single record before the record was processed
- SamValidation - only validate cigar and seq are same length if seq is not '*'
- BAM - update validation since SM tag is no longer a required RG field
- bam, SamRecord, add filename to some error messages
- README: change to Markdown syntax
- FastQ - update validation to allow interleaved
- SamFile - add improved support for reading streams