Skip to content

Conversation

@AntonieV
Copy link
Collaborator

@AntonieV AntonieV commented Jun 16, 2021

Description for plots used in report added, changes on deseq2 for comparisons of samples across the groups from each antibody, adaptations for snakemake workflow catalog, cleanup configs, README and ToDo's

Copy link
Member

@dlaehnemann dlaehnemann left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Great work, thanks a bunch!

I did not manage to go through everything, yet, but wanted to at least release this batch of comments. I should be approximately half way through...

Copy link
Member

@dlaehnemann dlaehnemann left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Once again, great work. And some more suggestions on the second half of this pull request. This is looking really good. We just have to clean up a bit more and we'll finally have that exemplary reimplementation of a nextflow workflow! 🎉

@AntonieV
Copy link
Collaborator Author

Thank you very much for the review and the many great suggestions!

Copy link
Member

@dlaehnemann dlaehnemann left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Thanks again for this major effort. And here finally comes my review. This all looks very good, and any remaining suggestions are either just formatting to improve readability or wording changes to make the report even clearer. Just two actual questions, I think. So we're almost done!

AntonieV and others added 15 commits February 2, 2022 00:00
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
AntonieV and others added 13 commits February 2, 2022 19:09
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
Co-authored-by: David Laehnemann <david.laehnemann@hhu.de>
@AntonieV
Copy link
Collaborator Author

AntonieV commented Feb 3, 2022

Thank you very much for reviewing the PR and the great and helpful suggestions!

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

3 participants