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--sam-compact false is not working

Status: Open.

#37 In smarco/gem3-mapper;

· y9c opened on Oct 18, 2024

GEM Mapper 'customed' unexpected error and core dump with -M parameter

Status: Open.

#36 In smarco/gem3-mapper;

· lrenders opened on Oct 18, 2024

Stuck on Alignment using --gpu

Status: Open.

#32 In smarco/gem3-mapper;

· JustinBellavance opened on May 30, 2022

Make Issue

Status: Open.

#31 In smarco/gem3-mapper;

· vincentye2 opened on Apr 1, 2022

feature request: option to move fastq comments to sam tags

Status: Open.

#30 In smarco/gem3-mapper;

· eboyden opened on Dec 22, 2021

Parsing FASTA/FASTQ error.

Status: Open.

#29 In smarco/gem3-mapper;

· Luobiny opened on Nov 24, 2021

index - Successfully built but ends with error

bug

Status: Open.

#24 In smarco/gem3-mapper;

· descostesn opened on Jan 21, 2021

Supplementary hits

feature request

question

Status: Open.

#23 In smarco/gem3-mapper;

· brendanofallon opened on Jan 18, 2021

Error: GEM.System.Error::Signal raised (no=11) [errno=0,Success]

gem-bs

Status: Open.

#17 In smarco/gem3-mapper;

· nchernia opened on Jun 25, 2020

Why is mappability removed?

gem-mappability

Status: Open.

#7 In smarco/gem3-mapper;

· magicDGS opened on May 1, 2018