Get date_time from file structure if METADATA is missing and emit a warning#2
Open
budhaChowdhury wants to merge 1 commit intoshaliulab:masterfrom
Open
Get date_time from file structure if METADATA is missing and emit a warning#2budhaChowdhury wants to merge 1 commit intoshaliulab:masterfrom
budhaChowdhury wants to merge 1 commit intoshaliulab:masterfrom
Conversation
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
This is useful to avoid the following error upon calling
load_ethoscopeThe error occurs because ms_after_ref is a vector of length 0 because it is derived from experiment_info$date_time, which is NULL or at least not Truthy (length 0, etc) when the METADATA table is empty. The fix is to get the date_time of the dbfile from the filename or the folder itself. However, all dbfiles should have a METADATA for documentation purposes.