[FEATURE] A partitioned HIBF layout. #230

Draft

smehringer wants to merge 30 commits intoseqan:mainfrom

smehringer:phib_by_user_bin

Commits on Dec 8, 2023

[FEATURE] Compute a partitioned HIBF layout.
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[MISC] automatic linting

seqan-actions
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fix configuration variable initialisation
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fix thread local variable hibf_config.
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NEW paritioning approach: folded.
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fix alternative
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adapt approach
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improve layout.
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new approach
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[MISC] automatic linting

seqan-actions
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smehringer
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FIX
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[MISC] automatic linting

seqan-actions
authored and
smehringer
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fix
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[MISC] automatic linting
seqan-actions
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Commits on Dec 9, 2023

Commits on Dec 11, 2023

[FEATURE] general.cpp can process multiple layouts.
smehringer
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Commits on Dec 13, 2023

Commits on Jan 9, 2024

Commits on Jan 10, 2024

Commits on Jan 18, 2024

Commits on Feb 15, 2024

[FEATURE] Adapt similarity approach by Knuts suggestions: random seed, choosing best-p by subsumption ratio.
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committed