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java.io.IOException: Unable to parse header with error: Your input file has a malformed header: VCFv4.4 is not a supported version

Status: Open.

#14 In seppinho/nft-vcf;

· fellen31 opened on Sep 24, 2025

Plugin not working well with BCF.GZ files

Status: Open.

#11 In seppinho/nft-vcf;

· LouisLeNezet opened on Nov 21, 2024

java.io.IOException: Index 9 out of bounds for length 8 - suggestion for clearer error message

Status: Open.

#9 In seppinho/nft-vcf;

· ToonRosseel opened on Oct 21, 2024

File clash if tbi index already exists

Status: Open.

#8 In seppinho/nft-vcf;

· crichgriffin opened on Oct 15, 2024

<code>.phased</code> not correct for VCFs containing phased &amp; unphased genotypes.

Status: Open.

#7 In seppinho/nft-vcf;

· rollf opened on Oct 1, 2024

Uncompressed VCF variants

Status: Open.

#6 In seppinho/nft-vcf;

· fellen31 opened on Sep 5, 2024

Differences in <code>phasedAutodetect</code> based on different Nextflow versions

Status: Open.

#5 In seppinho/nft-vcf;

· atrigila opened on Aug 31, 2024