Skip to content
Closed
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
14 changes: 14 additions & 0 deletions R/dependencies.R
Original file line number Diff line number Diff line change
Expand Up @@ -345,6 +345,9 @@ dependencies_from_description <- function(package, dcf) {
## dcf does not contain any of these elements we have no dependencies to
## speak of
dependency_levels <- c("Depends", "Imports", "LinkingTo", "Remotes")
if (package$is_dependency_package && isTRUE(getOption("lockbox.auto_install_suggests", TRUE))) {
dependency_levels <- c(dependency_levels, "Suggests")
}
if (!any(dependency_levels %in% colnames(dcf))) return(list())

## The parse_dcf function returns a matrix where rows correspond to packages
Expand All @@ -356,6 +359,7 @@ dependencies_from_description <- function(package, dcf) {
colnames(dcf)])[[package$name]])

if(NROW(dependencies_parsed) == 1 && NCOL(dependencies_parsed) == 1) return(list())
suggests_dependencies <- dependencies_parsed[grepl("^Suggests", rownames(dependencies_parsed)), 1]

## We separate out non-remote dependencies from remote dependencies, because
## they require different logic
Expand All @@ -367,9 +371,19 @@ dependencies_from_description <- function(package, dcf) {
vapply(non_remote_list, `[[`, character(1), "name")
, vapply(remote_list, `[[`, character(1), "name"))]

non_remote_list <- mark_suggests(non_remote_list, suggests_dependencies)
c(non_remote_list, remote_list)
}

mark_suggests <- function(non_remote_list, suggests_dependencies) {
lapply(non_remote_list, function(pkg) {
if (pkg$name %in% suggests_dependencies) {
pkg$is_suggests <- TRUE
}
pkg
})
}

get_non_remote_list <- function(dependencies_parsed) {
non_remote_dependencies <- dependencies_parsed[!grepl("^Remotes", rownames(dependencies_parsed)), ]

Expand Down
20 changes: 14 additions & 6 deletions R/library.R
Original file line number Diff line number Diff line change
Expand Up @@ -149,11 +149,19 @@ install_locked_package <- function(locked_package) {

## If we have an error during installation try again and show everything
if (is(output, "error") || !file.exists(pkgdir)) {
try(install_package(locked_package, temp_library, FALSE))
unlink(temp_library, TRUE, TRUE)
stop("Must have installed the package ",
crayon_red(as.character(locked_package$name)),
" of version ", sQuote(as.character(locked_package$version)))
if (is.null(locked_package$is_suggests)) {
try(install_package(locked_package, temp_library, FALSE))
unlink(temp_library, TRUE, TRUE)
stop("Must have installed the package ",
crayon_red(as.character(locked_package$name)),
" of version ", sQuote(as.character(locked_package$version)))
} else {
warning("Tried and failed to install suggested package ",
crayon_red(as.character(locked_package$name)),
" of version ", sQuote(as.character(locked_package$version)))
unlink(temp_library, TRUE, TRUE)
return()
}
}

ver <- package_version_from_path(pkgdir)
Expand Down Expand Up @@ -288,7 +296,7 @@ get_available_cran_version <- function(package, repo = "http://cran.r-project.or
, filter = c("OS_type", "subarch", "duplicates"))
available <- data.frame(unique(available[, c("Package", "Version")]))
}
if (!package$name %in% available$Package) {
if (!package$name %in% available$Package && is.null(package$is_suggests)) {
prefix <- "Locked"
if (package$is_dependency_package) prefix <- "Dependency"
stop(paste0(prefix, " Package ", package$name, " is not available on CRAN."
Expand Down
5 changes: 3 additions & 2 deletions tests/testthat/helper-random-dependencies.R
Original file line number Diff line number Diff line change
Expand Up @@ -45,10 +45,11 @@ get_rscript_command <- function(lockbox_dir, logfile_name, final_msg, install_di
option_cmd1 <- paste0("options(lockbox.directory = '", lockbox_dir,"');")
option_cmd2 <- paste0("options(lockbox.transient_dir = '", lockbox_dir
, "_transient","');")
lock_cmd <- "library(methods);lockbox::lockbox('generated_lockfile.yml')"
lock_cmd <- paste0("setwd('", dirname(lockbox_dir),"');library(methods);lockbox::lockbox('generated_lockfile.yml');")
option_cmd_sink <- paste0("sink('", logfile_name,"', split = TRUE);")
msg_cmd <- paste0("cat('", final_msg, "')")
paste0("cd ", install_dir, ";Rscript -e ","\"", option_cmd1, option_cmd2
, lock_cmd, ";", msg_cmd, "\" > ", logfile_name)
, lock_cmd, option_cmd_sink, msg_cmd, "\"")
}

## Not currently in use, but left in case we want to do randomized tests in the future
Expand Down