Added option for smoothing and reversing axis. #40
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mychan24 wants to merge 36 commits intorlbarter:masterfrom
Open
Added option for smoothing and reversing axis. #40mychan24 wants to merge 36 commits intorlbarter:masterfrom
mychan24 wants to merge 36 commits intorlbarter:masterfrom
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added mean as an option for heat.smooth
Allow x or y axis and labels to be reversed (e.g., 0,0 being on top left corner by using (x.axis.reverse=F, y.axis.reverse=T)
Reverse axis
add parameter and edited superheat.R to allow label color to remain unsorted based on label.col.sort=T
Sort label color, option to disable
This reverts commit 907355b.
This reverts commit afbc955.
update sort label color to only occur when label is "variable"
change github url
* Delete extra reverse axis for gg.heat
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Added an option (smooth.heat.type) to switch between using mean or median to smooth the cells when using smooth.heat.
Added (x.axis.reverse) and (y.axis.reverse) to allow user to flip the heatmap and label's orientation. For example, x.axis.reverse=F, y.axis.reverse=T will display matrix with origin (0,0) on the top left corner, with ascending number going downward on the y-axis. Have not tested with yr/yt options yet.
Label color (left.label.col, bottom.label.col) was getting sorted by the row-order when it is meant for the membership/cluster. Added if statement to only sort label color when label is for "variable".