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  1. HaplotypeTools HaplotypeTools Public

    A toolkit for identifying recombination and recombinant genotypes

    Perl 26 4

  2. Diamond2GO Diamond2GO Public

    Diamond2GO is a set of tools that can rapidly assign Gene Ontology (GO) terms and perform functional enrichment for large-scale functional genomics datasets.

    Perl 24 1

  3. allele_frequencies allele_frequencies Public

    calculate allele frequencies from mpileup format

    Perl 2 1

  4. FSTwindows FSTwindows Public

    Calculate FST values across sliding windows

    Perl 1

  5. Phylorust Phylorust Public

    Phylorust is a Rust-based command-line tool to generate phylogenetically informative SNP site sets and a FastTree from VCF file(s) and a FASTA reference genome.

    Rust 1

  6. Synima2 Synima2 Public

    Orthology prediction tool and synteny imager

    Rust 1