Skip to content

Fix compilation with HAVE_MPI #1

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
antonvnv wants to merge 1 commit into
base: master
Choose a base branch
from
Open

Fix compilation with HAVE_MPI #1

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion src/util/results2msa.cpp
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -143,7 +143,7 @@ int results2msa(int argc, const char **argv, const Command &command) {
size_t dbFrom = 0;
size_t dbSize = 0;
#ifdef HAVE_MPI
resultReaders[0].decomposeDomainByAminoAcid(MMseqsMPI::rank, MMseqsMPI::numProc, &dbFrom, &dbSize);
resultReaders[0]->decomposeDomainByAminoAcid(MMseqsMPI::rank, MMseqsMPI::numProc, &dbFrom, &dbSize);
Debug(Debug::INFO) << "Compute split from " << dbFrom << " to " << dbFrom + dbSize << "\n";
std::pair<std::string, std::string> tmpOutput = Util::createTmpFileNames(outDb, outIndex, MMseqsMPI::rank);
#else
Expand Down
2 changes: 1 addition & 1 deletion src/util/results2profile.cpp
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -72,7 +72,7 @@ int results2profile(int argc, const char **argv, const Command &command, bool re
size_t dbFrom = 0;
size_t dbSize = 0;
#ifdef HAVE_MPI
resultDbrs[0].decomposeDomainByAminoAcid(MMseqsMPI::rank, MMseqsMPI::numProc, &dbFrom, &dbSize);
resultDbrs[0]->decomposeDomainByAminoAcid(MMseqsMPI::rank, MMseqsMPI::numProc, &dbFrom, &dbSize);
Debug(Debug::INFO) << "Compute split from " << dbFrom << " to " << dbFrom + dbSize << "\n";
std::pair<std::string, std::string> tmpOutput = Util::createTmpFileNames(par.filenames[par.filenames.size() - 1], par.filenames[par.filenames.size() - 1] + ".index", MMseqsMPI::rank);
#else
Expand Down