PRESTO

Unified immunoinformatics for MHC presentation and TCR recognition.

Quickstart

python -m presto --help
python -m presto data list

Common commands

python -m presto data download --dataset iedb_mhc_ligand --agree-iedb-terms
python -m presto train synthetic --epochs 5 --checkpoint presto.pt
python -m presto predict presentation --checkpoint presto.pt --peptide SIINFEKL --allele HLA-A*02:01

Development

./develop.sh
./lint.sh
./test.sh

If you use uv, you can also run:

uv run presto --help