Copier update

.copier-answers.yml

@@ -1,10 +1,13 @@
 # Changes here will be overwritten by Copier; NEVER EDIT MANUALLY
-_commit: 14eaf11
+_commit: 6ee5264
 _src_path: gh:scipp/copier_template
 description: Flux simulation toy building library.
-github_linux_image: ubuntu-20.04
-max_python: '3.11'
+max_python: '3.12'
 min_python: '3.10'
+namespace_package: ''
+nightly_deps: ''
 orgname: physicscore
+prettyname: Thermoblock
 projectname: thermoblock
-year: 2023
+related_projects: ''
+year: 2024

.github/dependabot.yml

@@ -1,13 +1,9 @@
 version: 2
 updates:
-  - package-ecosystem: "github-actions"
-    directory: "/"
-    schedule:
-      interval: "weekly"
-    ignore:
-      # Optional: Official actions have moving tags like v1;
-      # if you use those, you don't need updates.
-      - dependency-name: "actions/*"
+  # Note: We are not listing package-ecosystem: "github-actions". This causes
+  # noise in all template instances. Instead dependabot.yml in scipp/copier_template
+  # triggers updates of github-actions in the *template*. We then use `copier update`
+  # in template instances.
   - package-ecosystem: "pip"
     directory: "/requirements"
     schedule:

.github/workflows/ci.yml

@@ -1,4 +1,3 @@
-
 name: CI
 
 on:
@@ -11,30 +10,37 @@ on:
 jobs:
   formatting:
     name: Formatting and static analysis
-    runs-on: 'ubuntu-20.04'
+    runs-on: 'ubuntu-22.04'
+    outputs:
+      min_python: ${{ steps.vars.outputs.min_python }}
+      min_tox_env: ${{ steps.vars.outputs.min_tox_env }}
     steps:
-      - uses: actions/checkout@v3
-      - uses: actions/setup-python@v3
+      - uses: actions/checkout@v4
+      - name: Get Python version for other CI jobs
+        id: vars
+        run: |
+          echo "min_python=$(cat .github/workflows/python-version-ci)" >> $GITHUB_OUTPUT
+          echo "min_tox_env=py$(cat .github/workflows/python-version-ci | sed 's/\.//g')" >> $GITHUB_OUTPUT
+      - uses: actions/setup-python@v5
+        with:
+          python-version-file: '.github/workflows/python-version-ci'
+      - uses: pre-commit/action@v3.0.1
         with:
-          python-version: '3.10'
-      - run: python -m pip install --upgrade pip
-      - run: python -m pip install -r requirements/ci.txt
-      - run: tox -e static
-      - uses: stefanzweifel/git-auto-commit-action@v4
+          extra_args: --all-files
+      - uses: pre-commit-ci/lite-action@v1.0.2
+        if: always()
         with:
-          commit_message: Apply automatic formatting
+          msg: Apply automatic formatting
 
   tests:
     name: Tests
     needs: formatting
     strategy:
       matrix:
-
-        os: ['ubuntu-20.04']
+        os: ['ubuntu-22.04']
         python:
-          - version: '3.10'
-            tox-env: 'py310'
-
+          - version: '${{needs.formatting.outputs.min_python}}'
+            tox-env: '${{needs.formatting.outputs.min_tox_env}}'
     uses: ./.github/workflows/test.yml
     with:
       os-variant: ${{ matrix.os }}
@@ -46,5 +52,5 @@ jobs:
     uses: ./.github/workflows/docs.yml
     with:
       publish: false
-      version: ${{ github.ref_name }}
+      linkcheck: ${{ contains(matrix.variant.os, 'ubuntu') && github.ref == 'refs/heads/main' }}
       branch: ${{ github.head_ref == '' && github.ref_name || github.head_ref }}

.github/workflows/docs.yml

@@ -1,4 +1,3 @@
-
 name: Docs
 
 on:
@@ -30,45 +29,45 @@ on:
         default: ''
         required: false
         type: string
+      linkcheck:
+        description: 'Run the link checker. If not set the link checker will not be run.'
+        default: false
+        required: false
+        type: boolean
 
 env:
   VERSION: ${{ inputs.version }}
 
 jobs:
   docs:
     name: Build documentation
-    runs-on: 'ubuntu-20.04'
+    runs-on: 'ubuntu-22.04'
     steps:
-
       - run: sudo apt install --yes graphviz pandoc
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           ref: ${{ inputs.branch == '' && github.ref_name || inputs.branch }}
+          repository: ${{ github.event.pull_request.head.repo.full_name }}
           fetch-depth: 0  # history required so cmake can determine version
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v5
         with:
-
-          python-version: '3.10'
+          python-version-file: '.github/workflows/python-version-ci'
       - run: python -m pip install --upgrade pip
       - run: python -m pip install -r requirements/ci.txt
-      - run: |
-          tox --skip-pkg-install -e docs -- thermoblock==${VERSION}
-
-          echo "target=$(python docs/version.py --version=${VERSION} --action=get-target)" >> $GITHUB_ENV
-        if: ${{ inputs.publish }}
+      - run: tox -e releasedocs -- ${VERSION}
+        if: ${{ inputs.version != '' }}
       - run: tox -e docs
-        if: ${{ !inputs.publish }}
-      - uses: actions/upload-artifact@v3
+        if: ${{ inputs.version == '' }}
+      - run: tox -e linkcheck
+        if: ${{ inputs.linkcheck }}
+      - uses: actions/upload-artifact@v4
         with:
-          name: html
+          name: docs_html
           path: html/
 
       - uses: JamesIves/github-pages-deploy-action@v4.6.0
         if: ${{ inputs.publish }}
         with:
           branch: gh-pages
           folder: html
-          target-folder: ${{ env.target }}
           single-commit: true
-          clean-exclude: release
-          ssh-key: ${{ secrets.GH_PAGES_DEPLOY_KEY }}

.github/workflows/python-version-ci

@@ -0,0 +1 @@
+3.10

.github/workflows/test.yml

@@ -1,16 +1,12 @@
-# SPDX-License-Identifier: BSD-3-Clause
-# Copyright (c) 2023 PhysicsCore contributors (https://github.com/physicscore)
-
 name: Test
 
 on:
   workflow_dispatch:
     inputs:
       os-variant:
-        default: 'ubuntu-20.04'
+        default: 'ubuntu-22.04'
         type: string
       python-version:
-        default: '3.10'
         type: string
       tox-env:
         default: 'test'
@@ -21,13 +17,15 @@ on:
       coverage-report:
         default: false
         type: boolean
+      checkout_ref:
+        default: ''
+        type: string
   workflow_call:
     inputs:
       os-variant:
-        default: 'ubuntu-20.04'
+        default: 'ubuntu-22.04'
         type: string
       python-version:
-        default: '3.10'
         type: string
       tox-env:
         default: 'test'
@@ -38,22 +36,26 @@ on:
       coverage-report:
         default: false
         type: boolean
+      checkout_ref:
+        default: ''
+        type: string
 
 jobs:
   test:
     runs-on: ${{ inputs.os-variant }}
 
     steps:
-      - uses: actions/checkout@v3
-      - uses: actions/setup-python@v3
+      - uses: actions/checkout@v4
+        with:
+          ref: ${{ inputs.checkout_ref }}
+      - uses: actions/setup-python@v5
         with:
           python-version: ${{ inputs.python-version }}
       - run: python -m pip install --upgrade pip
       - run: python -m pip install -r ${{ inputs.pip-recipe }}
       - run: tox -e ${{ inputs.tox-env }}
-      - uses: actions/upload-artifact@v3
+      - uses: actions/upload-artifact@v4
         if: ${{ inputs.coverage-report }}
         with:
           name: CoverageReport
           path: coverage_html/
-

.gitignore

@@ -1,13 +1,17 @@
+# Build artifacts
+build
 dist
 html
 .tox
-src/thermoblock.egg-info
+*.egg-info
 
 *.sw?
 
+# Environments
+venv
+
+# Caches
 .clangd/
-.idea/
-.vscode/
 *.ipynb_checkpoints
 __pycache__/
 .vs/
@@ -16,3 +20,12 @@ __pycache__/
 .pytest_cache
 .mypy_cache
 docs/generated/
+
+# Editor settings
+.idea/
+.vscode/
+
+# Data files
+*.data
+*.dat
+*.csv